[apollo] new user don't see any data

Discussion:

Jacques Dainat

2016-07-08 15:58:44 UTC

Version: 2.0.2-RC3-SNAPSHOT <https://github.com/GMOD/Apollo/releases>
Grails version: 2.4.5
Groovy version: 2.3.11
JVM version: 1.7.0_101

When Iâm adding a new user, everything seems to work fine, but when I try connecting as the newly created user, I cannot see any data (even the user name is not displayed).

I donât find what could be the error. Any help is greatly appreciated.

Best regards,

/Jacques

Lbl

2016-07-08 16:04:27 UTC

Permalink

I would use a stable release version (2.0.3) as we've likely fixed the error you've run into. Make sure to install npm and bower before installing.

Nathan

Post by Jacques Dainat
Version: 2.0.2-RC3-SNAPSHOT
Grails version: 2.4.5
Groovy version: 2.3.11
JVM version: 1.7.0_101
When Iâm adding a new user, everything seems to work fine, but when I try connecting as the newly created user, I cannot see any data (even the user name is not displayed).
<Screen Shot 2016-07-08 at 17.55.10.png>
I donât find what could be the error. Any help is greatly appreciated.
Best regards,
/Jacques
This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/

Jacques Dainat

2016-07-08 16:13:26 UTC

Permalink

Unfortunately I donât success to install the new versionâŠ

The deploy works nice (except some warning about my git versionâŠ).
I kept the database as it was before (many genomes and users already registered)âŠ shouldnât be a problem, isnât it ?

/Jacques

Post by Lbl
I would use a stable release version (2.0.3) as we've likely fixed the error you've run into. Make sure to install npm and bower before installing.
Nathan

Post by Jacques Dainat
Version: 2.0.2-RC3-SNAPSHOT <https://github.com/GMOD/Apollo/releases>
Grails version: 2.4.5
Groovy version: 2.3.11
JVM version: 1.7.0_101
When Iâm adding a new user, everything seems to work fine, but when I try connecting as the newly created user, I cannot see any data (even the user name is not displayed).
<Screen Shot 2016-07-08 at 17.55.10.png>
I donât find what could be the error. Any help is greatly appreciated.
Best regards,
/Jacques
This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/ <http://genomearchitect.org/>

This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/

Lbl

2016-07-08 16:42:12 UTC

Permalink

What is the git version error? If the version is too old the single-branch option that bower/git issues won't be respected.

If you can't upgrade git I'll send the workarounds.

Nathan

Post by Jacques Dainat
Unfortunately I donât success to install the new versionâŠ
<Screen Shot 2016-07-08 at 18.05.58.png>
The deploy works nice (except some warning about my git versionâŠ).
I kept the database as it was before (many genomes and users already registered)âŠ shouldnât be a problem, isnât it ?
/Jacques

Post by Lbl
I would use a stable release version (2.0.3) as we've likely fixed the error you've run into. Make sure to install npm and bower before installing.
Nathan

This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/

Jacques Dainat

2016-07-08 16:51:06 UTC

Permalink

Ooops my mistake ! It was the version 2.0.4 that I was trying to install. So, I installed the version 2.0.3 and everything seems to work fine.

Something strange during the installationâŠ you advise to use the version 2.5.5 of grails, but It was not working for me. A message during the installation process told me to use the version 2.5.4. This version 2.5.4 gave me lot of parameter problems but the .war works perfectly fine !

About the git version Iâm using, it is 1.7.1

/Jacques

Post by Lbl
What is the git version error? If the version is too old the single-branch option that bower/git issues won't be respected.
If you can't upgrade git I'll send the workarounds.
Nathan

Post by Lbl
I would use a stable release version (2.0.3) as we've likely fixed the error you've run into. Make sure to install npm and bower before installing.
Nathan

This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/ <http://genomearchitect.org/>

This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/

Nathan Dunn

2016-07-11 17:15:57 UTC

Permalink

Youâll need to use git 1.7.10 or better to support the single-branch option used by bower.

In lieu of this, you can clone jbrowse and checkout the individual dependencies in the bower.json file specified in the jbrowse directory.

Nathan

Post by Jacques Dainat
Ooops my mistake ! It was the version 2.0.4 that I was trying to install. So, I installed the version 2.0.3 and everything seems to work fine.
Something strange during the installationâŠ you advise to use the version 2.5.5 of grails, but It was not working for me. A message during the installation process told me to use the version 2.5.4. This version 2.5.4 gave me lot of parameter problems but the .war works perfectly fine !
About the git version Iâm using, it is 1.7.1
/Jacques

Post by Lbl
What is the git version error? If the version is too old the single-branch option that bower/git issues won't be respected.
If you can't upgrade git I'll send the workarounds.
Nathan

Post by Lbl
I would use a stable release version (2.0.3) as we've likely fixed the error you've run into. Make sure to install npm and bower before installing.
Nathan

This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/ <http://genomearchitect.org/>

This list is for the Apollo Annotation Editing Tool. Info at http://genomearchitect.org/